Prevalence and genetic structure of PPV-M in six European countries
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2008
Authors
Dallot, Sylvie
Kamenova, Ivanka
Glasa, Miroslav

Pittnerova, S.
Kominek, P.
Paunović, Svetlana A.
Jevremović, Darko

Virscek-Marn, M.
Mavric-Plesko, I.
Milusheva, S.

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The prevalence of PPV-M, PPV-D and PPV-Rec strains has been evaluated in 6 European countries (Bulgaria, Czech Republic, France, Serbia, Slovakia and Slovenia). A total of 547 samples have been collected from peach, apricot and plum trees and were characterised directly by PCR-based typing procedures targeting two genomic regions located upstream and downstream the recombination breakpoint located in the Nib gene shared by all PPV-Rec isolates. PPV-M isolates were found predominant in 4 of the 6 countries whereas PPV-Rec was detected in all countries but one. The genetic diversity and structure of PPV-M populations in Europe were evaluated by sequencing 27 isolates coming from 8 countries. The existence of 2 sub-clusters within the PPV-M group has been evidenced. This structure is apparently correlated with the geographical origin of the isolates.
Keywords:
Prunus / Plum pox virus / phylogeny / genetic diversitySource:
Proceedings of the Twentieth International Symposium on Virus and Virus-Like Diseases of Temperate Fruit Crops - Fruit Tree Diseases, 2008, 781, 227-+Publisher:
- International Society for Horticultural Science, Leuven 1
Funding / projects:
- ECONET from the French Foreign Office [10159PL]
DOI: 10.17660/ActaHortic.2008.781.34
ISSN: 0567-7572
WoS: 000256218900034
Scopus: 2-s2.0-44349097453
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Institut za voćarstvoTY - CONF AU - Dallot, Sylvie AU - Kamenova, Ivanka AU - Glasa, Miroslav AU - Pittnerova, S. AU - Kominek, P. AU - Paunović, Svetlana A. AU - Jevremović, Darko AU - Virscek-Marn, M. AU - Mavric-Plesko, I. AU - Milusheva, S. PY - 2008 UR - https://refri.institut-cacak.org/handle/123456789/131 AB - The prevalence of PPV-M, PPV-D and PPV-Rec strains has been evaluated in 6 European countries (Bulgaria, Czech Republic, France, Serbia, Slovakia and Slovenia). A total of 547 samples have been collected from peach, apricot and plum trees and were characterised directly by PCR-based typing procedures targeting two genomic regions located upstream and downstream the recombination breakpoint located in the Nib gene shared by all PPV-Rec isolates. PPV-M isolates were found predominant in 4 of the 6 countries whereas PPV-Rec was detected in all countries but one. The genetic diversity and structure of PPV-M populations in Europe were evaluated by sequencing 27 isolates coming from 8 countries. The existence of 2 sub-clusters within the PPV-M group has been evidenced. This structure is apparently correlated with the geographical origin of the isolates. PB - International Society for Horticultural Science, Leuven 1 C3 - Proceedings of the Twentieth International Symposium on Virus and Virus-Like Diseases of Temperate Fruit Crops - Fruit Tree Diseases T1 - Prevalence and genetic structure of PPV-M in six European countries EP - + IS - 781 SP - 227 DO - 10.17660/ActaHortic.2008.781.34 UR - conv_1365 ER -
@conference{ author = "Dallot, Sylvie and Kamenova, Ivanka and Glasa, Miroslav and Pittnerova, S. and Kominek, P. and Paunović, Svetlana A. and Jevremović, Darko and Virscek-Marn, M. and Mavric-Plesko, I. and Milusheva, S.", year = "2008", abstract = "The prevalence of PPV-M, PPV-D and PPV-Rec strains has been evaluated in 6 European countries (Bulgaria, Czech Republic, France, Serbia, Slovakia and Slovenia). A total of 547 samples have been collected from peach, apricot and plum trees and were characterised directly by PCR-based typing procedures targeting two genomic regions located upstream and downstream the recombination breakpoint located in the Nib gene shared by all PPV-Rec isolates. PPV-M isolates were found predominant in 4 of the 6 countries whereas PPV-Rec was detected in all countries but one. The genetic diversity and structure of PPV-M populations in Europe were evaluated by sequencing 27 isolates coming from 8 countries. The existence of 2 sub-clusters within the PPV-M group has been evidenced. This structure is apparently correlated with the geographical origin of the isolates.", publisher = "International Society for Horticultural Science, Leuven 1", journal = "Proceedings of the Twentieth International Symposium on Virus and Virus-Like Diseases of Temperate Fruit Crops - Fruit Tree Diseases", title = "Prevalence and genetic structure of PPV-M in six European countries", pages = "+-227", number = "781", doi = "10.17660/ActaHortic.2008.781.34", url = "conv_1365" }
Dallot, S., Kamenova, I., Glasa, M., Pittnerova, S., Kominek, P., Paunović, S. A., Jevremović, D., Virscek-Marn, M., Mavric-Plesko, I.,& Milusheva, S.. (2008). Prevalence and genetic structure of PPV-M in six European countries. in Proceedings of the Twentieth International Symposium on Virus and Virus-Like Diseases of Temperate Fruit Crops - Fruit Tree Diseases International Society for Horticultural Science, Leuven 1.(781), 227-+. https://doi.org/10.17660/ActaHortic.2008.781.34 conv_1365
Dallot S, Kamenova I, Glasa M, Pittnerova S, Kominek P, Paunović SA, Jevremović D, Virscek-Marn M, Mavric-Plesko I, Milusheva S. Prevalence and genetic structure of PPV-M in six European countries. in Proceedings of the Twentieth International Symposium on Virus and Virus-Like Diseases of Temperate Fruit Crops - Fruit Tree Diseases. 2008;(781):227-+. doi:10.17660/ActaHortic.2008.781.34 conv_1365 .
Dallot, Sylvie, Kamenova, Ivanka, Glasa, Miroslav, Pittnerova, S., Kominek, P., Paunović, Svetlana A., Jevremović, Darko, Virscek-Marn, M., Mavric-Plesko, I., Milusheva, S., "Prevalence and genetic structure of PPV-M in six European countries" in Proceedings of the Twentieth International Symposium on Virus and Virus-Like Diseases of Temperate Fruit Crops - Fruit Tree Diseases, no. 781 (2008):227-+, https://doi.org/10.17660/ActaHortic.2008.781.34 ., conv_1365 .